Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics
Year: 2016
Authors: DiBattista Joseph D., Wang Xin, Saenz-Agudelo Pablo, Piatek Marek J., Aranda Manuel, Berumen Michael L.
Reefgenomics.Org - a Repository for Marine Genomics Data
Year: 2016
Authors: LiewYi Jin, Aranda Manuel, Voolstra Christian R.
  • Repository
  • Database
  • Website
Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle
Year: 2016
Authors: Aranda M., Li Y., Liew Y. J., Baumgarten S., Simakov O., Wilson M. C., Piel J., Ashoor H., Bougouffa S., Bajic V. B., Ryu T., Ravasi T., Bayer T., Micklem G., Kim H., Bhak J., LaJeunesse T. C., Voolstra C. R.
  • Dinoflagellate Symbionts
  • Adaptation
  • Comparative Genomics
Distinct Bacterial Communities Associated with the Coral Model Aiptasia in Aposymbiotic and Symbiotic States with Symbiodinium
Year: 2016
Authors: Röthig Till, Costa Rúben M., Simona Fabia, Baumgarten Sebastian, Torres Ana F., Radhakrishnan Anand, Aranda Manuel, Voolstra Christian R.
  • coral reef
  • Cnidarian-dinoflagellate Symbiosis
  • Microbial Community Profiling
  • 16S rRNA Gene
  • Functional Profiling
Structural Molecular Components of Septate Junctions in Cnidarians Point to the Origin of Epithelial Junctions in Eukaryotes
Year: 2015
Authors: Ganot Philippe, Zoccola Didier, Tambutté Eric, Voolstra Christian R., Aranda Manuel, Allemand Denis, Tambutté Sylvie
  • Epitheliozoa
  • Claudin
  • Neurexin
  • Contactin
  • Neuroglian
  • Coracle
  • MAGUK
  • Na+/K+ ATPase Transporter
  • DSCAM
  • Nbl4
  • Para-cellular Pathway
  • Permselectivity
  • Corals
  • Ctenophores
  • Poriferans
  • Monosiga
  • Capsaspora
Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification
Year: 2015
Authors: Zoccola Didier, Ganot Philippe, Bertucci Anthony, Caminiti-Segonds Natacha, Techer Nathalie, Voolstra Christian R., Aranda Manuel, Tambutté Eric, Allemand Denis, Casey Joseph R., Tambutté Sylvie
  • Biocarbonate Transporters
  • Calcification
  • Stylophora
Microbiome structure of the fungid coral Ctenactis echinata aligns with environmental differences
Year: 2015
Authors: Roder Cornelia, Bayer Till, Aranda Manuel, Kruse Maren, Voolstra Christian R.
  • Coral Reefs
  • Ecological Niche
  • Holobiont
  • Metaorganism
  • Microbiome
  • Symbiosis
The Genome of Aiptasia, a Sea Anemone Model for Coral Symbiosis
Year: 2015
Authors: Baumgarten S., Simakov O., Esherick L. Y., Liew Y. J., Lehnert E. M., Michell C. T., Li Y., Hambleton E. A., Guse A., Oates M. E., Gough J., Weis V. M., Aranda M., Pringle J. R., Voolstra C. R., Knowlton N.
  • Coral Reefs
  • Endosymbiosis
  • Horizontal Gene Transfer
  • Dinoflagellate
  • Pattern-recognition Receptors
Identification of MicroRNAs in the Coral Stylophora pistillata
Year: 2014
Authors: Liew Yi Jin, Aranda Manuel, Carr Adrian, Baumgarten Sebastian, Zoccola Didier, Tambutté Sylvie, Allemand Denis, Micklem Gos, Voolstra Christian R.
  • miRNA
  • Coral Calcification
  • Symbiosis
Bacteria of the genus Endozoicomonas dominate the microbiome of the Mediterranean gorgonian coral Eunicella cavolini
Year: 2013
Authors: Bayer T., Arif C., Ferrier-Pagès C., Zoccola D., Aranda M., Voolstra C. R.
  • Microbial Communities
  • Gorgonian
  • Eunicella Cavolini
  • 16S Tag Sequencing
In-situ Effects of Eutrophication and Overfishing on Physiology and Bacterial Diversity of the Red Sea Coral Acropora hemprichii
Year: 2013
Authors: Jessen Christian, Villa Lizcano Javier Felipe, Bayer Till, Roder Cornelia, Aranda Manuel, Wild Christian, Voolstra Christian R.
  • 16S Based
  • Bacterial Community
  • Eutrophication
The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria
Year: 2013
Authors: Bayer Till, Neave Matthew J., Alsheikh-Hussain Areej, Aranda Manuel, Yum Lauren K., Mincer Tracy, Hughen Konrad, Apprill Amy, Voolstra Christian R.
  • Coral
  • Endozoicomonas
  • Phylogeny
Bacterial profiling of White Plague Disease in a comparative coral species framework
Year: 2013
Authors: Roder Cornelia, Arif Chatchanit, Bayer Till, Aranda Manuel, Daniels Camille, Shibl Ahmed, Chavanich Suchana, Voolstra Christian R.
  • 16S rRNA Gene Microarray
  • Gulf of Thailand
  • Pavona Duerdeni
  • Porites Lutea
  • Coral Disease
  • White Plague Disease (WPD)
Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals
Year: 2013
Authors: Baumgarten Sebastian, Bayer Till, Aranda Manuel, Liew Yi Jin, Carr Adrian, Micklem Gos, Voolstra Christian R.
  • Symbiodinium Dinoflagellates
  • Scleractinian Corals
  • Symbiont
  • Coral Reefs
  • Small RNA (smRNA)
  • MicroRNA (miRNA)
  • Small Interfering RNA (siRNA)
  • mRNA
  • Expression Profiling
  • RNAseq
Symbiodinium transcriptomes: Genome insights into the dinoflagellate symbionts of reef-building corals
Year: 2012
Authors: Bayer T., Aranda M., Sunagawa S., Yum L. K., DeSalvo M. K., Lindquist E., Coffroth M. A., Voolstra C. R., Medina M.
  • Symbiodinium
  • Transcriptome
  • Transcription Factors
Evolutionary insights into scleractinian corals using comparative genomic hybridizations
Year: 2012
Authors: Aranda Manuel, DeSalvo Michael K., Bayer Till, Medina Monica, Voolstra Christian R.
  • Coral Reefs
  • Comparative Genomic Hybridization (CGH)
  • Microarray
  • Mitochondria
  • Evolution
Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
Year: 2011
Authors: Voolstra, Sunagawa, Matz, Bayer, Aranda, Buschiazzo, DeSalvo, Lindquist, Szmant, Coffroth, Medina
  • Evolution
  • Coral
  • Interaction
Differential sensitivity of coral larvae to natural levels of ultraviolet radiation during the onset of larval competence
Year: 2011
Authors: Aranda, Banaszak Anastazia, Bayer, Luyten James, Medina, Voolstra Christian
  • Development
  • Gene Expression
  • Global Climate Change
  • Neurogenesis
  • Stress Response
  • Ultraviolet Radiation
Identification of a gene expression core signature for Duchenne muscular dystrophy (DMD) via integrative analysis reveals novel potential compounds for treatment
Year: 2010
Authors: N. Ichim-Moreno, M. Aranda, C. R. Voolstra
  • Biocomputing
  • Muscle
  • DMD
  • Duchenne Muscular Dystrophy
  • Gene Expression Core Signature Identification
  • Genetic Disorders
  • Integrative Analysis Reveals Novel Potential Compounds
  • Muscle Degeneration
  • Calcium
  • Cardiac Disease
  • Degenerative Diseases
  • Drugs
Delimiting the conserved features of hunchback function for the trunk organization of insects
Year: 2008
Authors: Henrique Marques-Souza Manuel Aranda, Diethard Tautz
  • Gap Gene Hunchback
  • Drosophila Acts